PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lj2g3v0896450.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Loteae; Lotus
Family NAC
Protein Properties Length: 458aa    MW: 51751.6 Da    PI: 7.3812
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lj2g3v0896450.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.71.9e-35471901128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 
                      lp+G++F+Ptd+el+ e+L++kve+++       ++++  +i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+        
  Lj2g3v0896450.1  47 LPAGVKFDPTDQELI-EHLEAKVEARNnmrshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqnecdlq 138
                      799************.99******99976665443333333766646**********.555666799******************845555544 PP

              NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                        + +W++tgk+++v+  +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  Lj2g3v0896450.1 139 GGETRWHKTGKTRPVMM-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 190
                      33778************.999***********5547999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3842209IPR003441NAC domain
PROSITE profilePS5100532.81247209IPR003441NAC domain
PfamPF023653.9E-1648190IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MNKMNNLSSV SSSDLIDAKL EEHQLGGSKQ CPGCGHKFEG KRDWLGLPAG VKFDPTDQEL  60
IEHLEAKVEA RNNMRSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS KHFFHRPSKA  120
YTTGTRKRRK IQNECDLQGG ETRWHKTGKT RPVMMNGKQK GCKKILVLYT NFGKNRKPEK  180
TNWVMHQYHL GQHEEEREGE LVVSKIFYQT QPRQCNWSDR SACTTGEGSG ELPNGGRRDS  240
GSGSCSSKEI VPTHRDEMTS VIVSGVNPMT GFTHALDIQQ QLKSDHFSFI PFRKSFDHEV  300
GIVEASTARE VQASGSCEEV HERHRQHVTH HHQQQQQQQQ HHHQIANSAF HISRPSHPIS  360
TIISPLPAPL HHTSIILDEN SCHVNRVMLQ NDNFQQQQQQ QHHKLGGRSA SGLEELIMGC  420
TSSSTDIKPG STITNPQEAE WLKYSSYWPD PDNPDHHG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-124519013140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00460DAPTransfer from AT4G29230Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006572929.10.0PREDICTED: protein BEARSKIN2-like isoform X2
TrEMBLK7K1430.0K7K143_SOYBN; Uncharacterized protein
STRINGGLYMA01G00880.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45203458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-178NAC domain containing protein 75